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Chemtool
Free software for drawing organic molecules and storing them as an X-Bitmap, LaTeX and XFig file. For Linux/Unix, includes source code, screenshots, and downloads.
WinDrawChem/XDrawChem
Free structure drawing software for Windows and Unix, with simple spectral predictions. Source code available.
ChemPen
Structure drawing, 3D modeling and NMR prediction. Demos and online ordering available.
PLT
Free structure drawing program for Windows; capable of exporting structures as metafiles, bitmaps, and HTML pages.
JChemPaint
Free, open-source editor for 2D chemical structures. Written in Java.
JMolDraw
Drawing applet written in Java for use in database applications in chemistry.
Chemical Drawing Programs Review
Detailed comparison between ISIS/Draw, ChemDraw, ChemWindow, ChemSketch, Chemistry 4-D Draw, WinPLT, MarvinSketch, ChemPen, WinDrawChem, and JChemPaint.
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